Sep 20 – 25, 2026
University of Graz
Europe/Vienna timezone

Canceled: Geometric principles for the design of self-assembling flexible subunits

Sep 24, 2026, 12:00 PM
15m
HS 15.11 (University of Graz)

HS 15.11

University of Graz

15 - RESOWI B, 1st floor
3) Contributed talk M37 - Emergent Behavior in Soft and Living Matter Mini-Colloquium

Speaker

Botond Tyukodi (Babes Bolyai University)

Description

Recent advances in synthetic methods enable designing subunits that self-assemble
into structures with precise, finite sizes and well-defined architectures, but yields are
frequently suppressed by the formation of off-target metastable structures. Increasing
the complexity (the number of distinct subunit types) can inhibit off-target structures,
but leads to slower kinetics and higher synthesis costs. Here, we study icosahedral
shells formed of programmable triangular subunits as a model system, and identify
design principles that produce the highest target yield at the lowest complexity.
We use a symmetry-based construction to create a range of design complexities,
starting from the maximal symmetry Caspar-Klug assembly up to the fully
addressable, zero-symmetry assembly. Kinetic Monte Carlo simulations reveal that
the most prominent defects leading to off-target assemblies are disclinations at sites
of rotational symmetry. We derive symmetry-based rules for identifying the optimal
(lowest-complexity, highest-symmetry) design that inhibits these disclinations, leading
to robust, high-fidelity assembly of targets with arbitrarily large, yet precise, finite
sizes. The optimal complexity varies non-monotonically with target size, with `magic'
sizes appearing for high-symmetry designs in which symmetry axes do not intersect
vertices of the triangular net. The optimal designs at magic sizes require 12 times
fewer inequivalent interaction-types than the (minimal symmetry) fully addressable
construction, which greatly reduces the timescale and experimental cost required to
achieve high fidelity assembly of large targets. This symmetry-based principle for
pruning off-target assembly generalizes to diverse architectures with different
topologies.

Author

Botond Tyukodi (Babes Bolyai University)

Co-authors

Dr Daichi Hayakawa (Brandeis University) Dr Douglas Hall (UMass Amherst) Dr Fernando Caballero (Brandeis University) Dr Gregory Grason (UMass Amherst) Dr Michael Hagan (Brandeis University) Dr W. Benjamin Rogers (Brandeis University)

Presentation materials

There are no materials yet.